Anticancer activity of ursolic acid on retinoblastoma cells determined by bioinformatics analysis and validation
Introduction
Retinoblastoma (Rb) originates from the cells of the embryonic nuclear layer of the retina. Among all malignant tumors in children, the incidence is second only to leukemia, with an annual incidence of 1/20,000–1/15,000, and has a genetic predisposition (1). About 95% of children are younger than 5 years old at the time of onset. About 75% of children have monocular Rb, and the age of onset is 2 to 3 years. The onset of binocular Rb is earlier (2-4). There is no gender difference in onset. Globally, there are 9,000 new cases every year (5) and 3,000–4,000 deaths (6). There are about 1,100 new cases every year domestically (5,7). Rb not only harms children’s health and visual function, but also threatens the lives of children. In developing countries, most children with Rb have developed to the late stage when they are found, and the survival rate is much lower than that in developed countries (8,9). Early detection of Rb can provide better treatment for children, and early diagnosis and early treatment are key to improving the cure rate and reducing the mortality rate (10). Targeted biological therapy is the future direction of research and development. Therefore, in-depth study of the related mechanisms of Rb tumor growth provides a scientific basis for early diagnosis, treatment, and prognosis evaluation of Rb.
Ursolic acid (UA), a pentacyclic triterpenoid of α-aromatic alcohol type, is mainly distributed in gardenia, oldenlandia diffusa, bearberry leaves, loquat leaves, Ligustrum lucidum, hawthorn, and Prunella vulgaris. The molecular formula of UA is C30H48O3. Studies have shown that UA has a variety of significant pharmacological effects, such as protecting the liver (11), alleviating lipid accumulation (12), anti-tumor effects (13), and anti-inflammatory effects (14). Studies have confirmed that UA can inhibit the proliferation of malignant cells, promote their apoptosis, affect the invasion and metastasis of malignant tissues, and inhibit the angiogenesis of malignant cells and epithelial-mesenchymal transition (15,16). UA can inhibit the cell proliferation of Rb (17), but there is no research showing how UA exerts anticancer effects on Rb.
Stearoyl-CoA desaturase (SCD) is a key enzyme in the process of de novo fatty acid synthesis. SCD belongs to the dehydrogenase family, and its role is to catalyze the conversion of saturated fatty acid (SFA) into monounsaturated fatty acid (MUFA). This is achieved by introducing a cis double bond between carbon 9 and 10 of the acyl-CoA substrate. The most common process is to convert palmitic acid and stearic acid into palmitoleic acid and oleic acid, respectively (18,19). SCD is a protein anchored on the endoplasmic reticulum membrane with a protein size of about 37 kDa. Studies on tumor metabolism have shown that lipid synthesis in tumors, especially the production of fatty acids, is increased. The expression of SCD is significantly positively correlated with the occurrence and development of lung cancer, breast cancer, colorectal cancer, kidney cancer, liver cancer, and other tumors (20-24). Through bioinformatics analysis, the expression level of SCD has been shown to be related to the proliferation, migration, invasion, and inflammation of Rb. However, the role of SCD in Rb has not yet been reported.
Therefore, in this study, we aimed to explore the effect of UA on the growth of Rb and its mechanism of action. It was predicted by bioinformatics methods that SCD can affect the growth of Rb. We hypothesized that UA could inhibit the proliferation, migration, invasion of Rb by regulating USD. Firstly, UA was tested in vitro and was shown to inhibit the proliferation, migration, and invasion of SO-RB50 and Y79 cells, and the inhibitory effect of UA on Rb growth was also assessed in vivo. Then, SCD agonists and inhibitors were transfected into SO-RB50 and Y79 cells. Through in vitro experiments, it was found that SCD promoted the proliferation, migration, and invasion of SO-RB50 and Y79 cells, and inhibited inflammation. Finally, in vitro experiments verified that UA can down-regulate the expression of SCD, thereby inhibiting the growth of Rb.
We present the following article in accordance with the ARRIVE reporting checklist (available at https://dx.doi.org/10.21037/atm-21-4617).
Methods
Microarray analysis
The Gene Expression Omnibus (GEO) database was used to filter the chip, then the GEO2R software (https://www.ncbi.nlm.nih.gov/geo/geo2r/) was used to analyze the microarray data (GSE97508, GSE24673, and GSE110811) (25,26). Gene chips were screened according to the conditions of P<0.05 and logFC greater than 1. In order to obtain more accurate information, the screening conditions of SCD with P<0.05 and logFC greater than 1 were improved. The study was conducted in accordance with the Declaration of Helsinki (as revised in 2013).
Gene set enrichment analysis (GSEA)
GSEA from the TCGA database (27,28) was performed to analyze the relationship between the expression level of SCD and the proliferation, migration, invasion, and inflammation in Rb patients.
Cell culture
SO-RB50 and Y79 cells were obtained from American Type Culture Collection. SO-RB50 and Y79 cells were cultured in RPMI-1640 medium with 10% exosome-free fetal bovine serum (FBS). The cells were subsequently incubated at 37 °C in a tissue culture chamber with 95% oxygen (O2) and 5% carbon dioxide (CO2).
Cell treatment
UA was obtained from Mansite (Chengdu, China) with a purity of >98%. Cells were divided into four groups, including the 0 µM UA group, 10 µM UA group, 20 µM UA group, and 240 µM UA group.
Cell transfection
Plasmid cloning DNA (pcDNA), pcDNA-SCD, shRNA-NC, shRNA-SCD 1#, and shRNA-SCD 2# were obtained from GenePharma (Shanghai, China) and were used for efficiently transfection of Rb cells. According to the manufacturer’s instructions, the above plasmids diluted by Lipofectamine 3000 (Invitrogen, CA, USA) were transfected into SO-RB50 and Y79 cells, respectively.
Cell counting kit-8 (CCK-8) assay
Cell proliferation was measured using the CCK-8 assay kit (Dojindo, Japan). A total of 100 μL of cell suspension was added to each well of a 96-well plate (Corning, NY, USA). The cells were incubated at 37 °C and 5% CO2 for 24 h. Then, 10 μL of CCK-8 solution was added to each well (being careful not to create bubbles in the wells when dripping). The cells were placed in an incubator for 1–4 h. The absorbance was measured at 450 nm with a microplate reader (Thermo Fisher Scientific, USA). The experiment was repeated 3 times.
Colony formation assay
SO-RB50 and Y79 cells were pretreated with phosphate buffered saline (PBS). The cells were then cultured in a 6-well plate with 500 cells per well for 14 days. After that, the medium was discarded, and the cells were fixed with ethanol for 30 min and stained with 0.5% crystal violet. Finally, the cells were rinsed with deionized water to dry, and images were taken for observation.
Transwell assay
A Matrigel-covered Transwell chamber (24 wells) from BD Biotech was used for the experiment. The Transwell chamber was pre-placed in a 24-well plate, and 600 µL of DMEM medium containing 10% FBS was added to the bottom of it. The resuspended cells (100 µL) were seeded into the upper chamber (150,000 cells per well). After incubating for 48 h in an incubator, the cells were slowly washed twice with 1× PBS, and were fixed in 4% paraformaldehyde for 20 min at room temperature. The cells were stained using 0.1% crystal violet for 20 min. An optical microscope was employed to capture images. The cells were observed and counted, and the results were depicted in statistical graphs. The experiment was repeated 3 times.
Wound scratch test
Each group of cells was marked, and a square mark was drawn about 2 mm wide on the back of a 6-well plate. The cell suspension was placed into a 6-well plate with 10% FBS and DMEM medium. After the cells were overgrown, a small pipette tip was used to make a vertical mark on the back of the 6-well plate. Then, the plate was put in a 37 °C, 5% CO2 incubator for cultivation. The 6-well plate was imaged under an inverted optical microscope (Olympus, Japan) for observation. The images were taken at 0 and 24 h, and the square was used for positioning when imaging. Image J software was employed to measure the width of the scratch area and calculate the healing rate of the cell scratches. The experiment was repeated three times.
ELISA
To quantify cytokine levels, specific ELISA kits for IL-8 and IL-6 were used according to the manufacturer’s instructions. In short, samples from different experimental groups and standard samples of known concentration provided by the kit were added to the kit plate, incubated with the kit reagents, and analyzed by measuring the absorbance at 450 nm. Later, using the standard samples, a standard curve was created with GraphPad Prism 7 software to interpolate the sample absorbance values and obtain the cytokine concentration in each case.
Real-time reverse transcription-polymerase chain reaction (qRT-PCR)
According to the manufacturer’s protocol, total RNA in SO-RB50 and Y79 cells was isolated using the TRIzol reagent kit (Invitrogen, Beijing, China). The MiReasy Mini Spin Column Kit (Qiagen Company, Germany) was used to obtain RNA with higher purity according to the manufacturer’s protocol. The NanoDrop 2000 was used to check the concentration of the total RNA immediately, which was then reverse transcribed as soon as possible to avoid degradation. The PrimeScript RT Reagent Kit (TakaRa, Dalian, China) was used for reverse transcription to synthesize cDNA. The synthesized cDNA was amplified by PCR using SYBR Premix Ex Taq™ II (TakaRa, Dalian, China), according to the instructions then the program on the Bio-Rad CFX-96 system was set (Bio-Rad, CA, USA). Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) was used for normalization. The qRT-PCR data were analyzed using the 2–ΔΔCt method to calculate the relative expression levels of mRNA.
Western blot assay
Proteins were isolated from SO-RB50 and Y79 cells using RIPA lysis buffer (Beyotime Institute of Biotechnology, Shanghai, China) according to the manufacturer’s protocol. The BCA Protein Assay Kit (Beyotime Institute of Biotechnology, Shanghai, China) was employed to detect the protein concentrations. The proteins were separated by 10% dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE). Subsequently, proteins were transferred onto polyvinylidene difluoride (PVDF) membranes (Merck Millipore) by electroblotting. In Tris Buffered Saline Tween (TBST), the membranes were blocked with 5% skim milk for 1 h, and the membranes were incubated with the primary antibody, rabbit anti-SCD, overnight at 4 °C. Membranes were then incubated with corresponding antibodies conjugated to HRP for 1 h at room temperature. The ECL reagent was used to visualize targeted bands, and quantitative analysis was carried out by image laboratory software (Bio-Rad). β-actin was used as the internal control to standardize sample loading. The band densities were determined and analyzed with an automatic digital gel image analysis system (Bio-Rad CFX-96, CA, USA).
Nude mouse subcutaneous xenograft model
A xenograft model was generated as previously described (29). All mice were weighed before the start of the experiment. All animal experiments were carried out according to the NIH Guide for the Care and Use of Laboratory Animals and were approved by the Suzhou high tech Zone People’s Hospital. A protocol was prepared before the study without registration. Briefly, 4-week-old athymic balb/c nude male mice weighing 19.56±2.37 g were randomized into treatment and control groups (n=5). SO-RB50 cells were subcutaneously injected (5×106 cells/mouse) into each mouse. The control group was treated with 0.1% DMSO and the treatment group received 200 mg/kg i.p. UA twice a week (30). The treatment was continued for 7 weeks from the date of randomization. The tumor sizes were recorded once every week and were determined by a Vernier caliper and calculated. At the end of 7 weeks, mice were sacrificed by a lethal intraperitoneal dose of phenobarbital (40 mg/kg b.w.), and tumor volumes and weight were measured.
Statistical analysis
Using GraphPad Prism 7.0, an unpaired t-test with Welch’s correction was performed to assess the endpoints, including differences in SCD expression, proliferation, migration, invasion, and cytokine levels. All statistical tests were two-sided, and P<0.05 was considered significant.
Results
Network pharmacology analysis of in Rb
SwissTarget (top 15) and TargetNet (pro >0) were used to predict the targets of UA. Using the intersection point between SwissTarget and TargetNet, a total of 48 targets of UA were finally obtained. GEO2R was used to analyze the up-regulated genes in the GSE97508, GSE24673, and GSE110811 datasets. Using the intersection point with the UA targets, a common gene SCD is finally obtained (Figure 1A). The results showed that the expression of SCD in the GSE97508, GSE24673, and GSE110811 datasets was significantly higher than that in normal human plasma (Figure 1B). Figure 1C showed that SCD expression was correlated with disease severity in the GSE110811 dataset. Grouped by the median SCD expression level, patients with Rb in the GSE110811 dataset were divided into 2 groups with high and low SCD expression. GSEA was used to analyze the relationship between SCD expression level and cell proliferation, migration, and invasion. The results showed that the negative regulatory cell proliferation and migration gene sets were significantly enriched in the low SCD expression group, while the cell invasion gene set was enriched in the high SCD expression group (Figure 1D-1F).
UA inhibited the proliferation of Rb cells in vitro
The CCK-8 assay results showed that UA inhibited SO-RB50 and Y79 cell viability compared with the 0 µM UA group (Figure 2A,2B). The results of the clone formation assay showed that UA suppressed SO-RB50 and Y79 cell proliferation compared with the 0 µM UA group (Figure 2C).
UA inhibited the migration and invasion of Rb cells in vitro
The results of the wound scratch test showed that UA inhibited SO-RB50 and Y79 cell migration compared with the 0 µM UA group (Figure 3A,3B). The Transwell assay results showed that UA suppressed SO-RB50 and Y79 cell invasion compared with the 0 µM UA group (Figure 3C). These results suggested that UA inhibited Rb cell proliferation, migration, and invasion.
UA suppressed the growth of transplanted tumors in vivo
As shown in Figure 4A-4C, compared with the control group, UA suppressed the increase of transplanted tumor volume. UA also inhibited the increase of transplanted tumor weight (Figure 4D). These results suggested that UA suppressed the growth of transplanted tumors in vivo.
SCD promoted malignant phenotypes of Rb cells
Western blot results showed that the relative protein expression level of SCD was significantly increased in transfected SO-RB50 and Y79 cells, indicating that the overexpression of SCD was successfully constructed (Figure 5A). The CCK-8 assay results showed that SCD overexpression promoted SO-RB50 and Y79 cell viability compared with the vector group (Figure 5B,5C). The results of the clone formation assay showed that the overexpression of SCD induced SO-RB50 and Y79 cell proliferation compared with the vector group (Figure 5D). The results of the wound scratch test showed that the overexpression of SCD promoted SO-RB50 and Y79 cell migration compared with the vector group (Figure 5E,5F). Transwell assay results showed that SCD overexpression promoted SO-RB50 and Y79 cell invasion compared with the vector group (Figure 5G).
Low SCD expression suppressed the proliferation, migration, and invasion of Rb cells in vitro
Western blot was used to detect the relative protein expression level of SCD, and the results showed that the relative protein expression level of SCD was significantly decreased in transfected SO-RB50 and Y79 cells, indicating that low expression of SCD was successfully constructed (Figure 6A). The CCK-8 assay results showed that low SCD expression inhibited SO-RB50 and Y79 cell viability compared with the sh-NC group (Figure 6B,6C). The results of the clone formation assay showed that low expression of SCD suppressed SO-RB50 and Y79 cell proliferation compared with the sh-NC group (Figure 6D). The results of the wound scratch test showed that low expression of SCD inhibited SO-RB50 and Y79 cell migration compared with the sh-NC group (Figure 6E,6F). Transwell assay results showed that low SCD expression suppressed SO-RB50 and Y79 cell invasion compared with the sh-NC group (Figure 6G). These results suggested that SCD suppressed Rb cell proliferation, migration, and invasion.
SCD inhibited inflammation as determined by GSEA and cytokine analysis
According to the median SCD expression level, Rb patients were divided into 2 groups with high/low SCD expression, then GSEA was performed. The results showed that high expression levels of SCD inhibited inflammation (Figure 7A). RT-qPCR was used to detect the relative mRNA expression levels of IL-8, IL-6, CXCL1, and CCL2, and the results showed that the relative mRNA expression levels of IL-8, IL-6, CXCL1, and CCL2 were significantly decreased in both SO-RB50 and Y79 cells in the SCD group compared with the vector group (Figure 7B,7C). ELISA was used to detect the relative protein expression levels of IL-8 and IL-6, and the results showed that the relative protein expression levels of IL-8 and IL-6 were significantly decreased in both SO-RB50 and Y79 cells in the SCD group compared with the vector group (Figure 7D-7G). RT-qPCR was used to detect the relative mRNA expression levels of IL-8, IL-6, CXCL1, and CCL2, and the results showed that the relative mRNA expression levels of IL-8, IL-6, CXCL1, and CCL2 were significantly increased both in SO-RB50 and Y79 cells in the shSCD 1# and shSCD 2# groups compared with the sh-NC group (Figure 7H,7I). ELISA was used to detect the relative protein expression levels of IL-8 and IL-6, and the results showed that the relative protein expression levels of IL-8 and IL-6 were significantly increased in both SO-RB50 and Y79 cells in the shSCD 1# and shSCD 2# groups compared with the sh-NC group (Figure 7J-7N). These results suggested that SCD inhibited inflammation.
UA inhibited the proliferation of Rb cells through SCD
Western blot was used to detect the relative protein expression level of SCD, and the results showed that the relative protein expression level of SCD was significantly down-regulated in UA-treated SO-RB50 and Y79 cells. Furthermore, the relative protein expression level of SCD was down-regulated significantly with the increase of UA concentration, as the time of UA action increased (Figure 8A,8B). CCK-8 assay results showed that SO-RB50 and Y79 cell viability were inhibited in the UA + SCD group compared with the SCD group (Figure 8C,8D). The results of the clone formation assay showed that SO-RB50 and Y79 cell proliferation were suppressed in the UA + SCD group compared with the SCD group (Figure 8E).
UA inhibited the migration and invasion of Rb cells through SCD
The results of the wound scratch test showed that SO-RB50 and Y79 cell migration were inhibited in the UA + SCD group compared with the SCD group (Figure 9A,9B). The Transwell assay results showed that SO-RB50 and Y79 cell invasion were suppressed in the UA + SCD group compared with the SCD group (Figure 9C). These results suggested that UA inhibited the proliferation, migration, and invasion of Rb cells through SCD.
Discussion
Rb mostly occurs in children under 5 years old and accounts for about 3% of all childhood tumors. It can affect one eye, both eyes, one after another or at the same time, and has a family genetic tendency. It is the most serious and harmful malignant tumor among infant eye diseases. Its visual prognosis is poor, and it is prone to intracranial and distant metastasis, which often endangers the life of the patient. The treatment method is mainly chemotherapy combined with local treatment. Chemotherapy mainly includes intravenous chemotherapy and arterial chemotherapy. The therapeutic effect is limited and the side effects are relatively large. In recent years, with the continuous advancement of clinical diagnosis and treatment methods, the treatment of Rb has been greatly improved, but early detection is still difficult. Overall, finding ways to inhibit the proliferation, migration, and invasion of Rb will facilitate great progress in the diagnosis and treatment of Rb.
UA is a five-ring triterpenoid compound with a wide range of pharmacological activities. Its anti-tumor effect is particularly prominent. The anti-tumor effect of UA has been reported in a variety of diseases, including breast cancer (31), leukemia (32), prostate cancer (33), melanoma (34), endometrial cancer (35), and lung cancer (36), among others. A large number of studies have shown that UA can inhibit tumor growth and metastasis by inhibiting tumor cell proliferation, invasion, and metastasis, and its mechanism is related to the expression of related genes on tumor cells, signal transduction pathways of tumor cells, and the cell cycle of tumor cells (37). Silva et al. showed that UA can inhibit the proliferation of Rb cells and promote their apoptosis. It is therefore one of the most promising anti-Rb drugs (17). In this study, UA inhibited Rb cell proliferation, migration, and invasion. At the same time, UA suppressed the growth of transplanted tumors in vivo.
SCD has 2 functions in the body, namely β-oxidation of fatty acids and the regulation of lipid synthesis. Normally, fatty acids enter the mitochondria and are oxidized inside the mitochondria. The rate-limiting step of this process relies on the mitochondrial carnitine palmitoyltransferase shuttle system, which cannot function without malonyl-CoA. When the expression of SCD1 decreases, it will lead to an increase in SFA. The increase in SFA can directly inhibit the activity of acetyl-CoA carboxylase (ACC), thereby reducing the level of malonyl-CoA in the cell. Therefore, as the expression of SCD1 decreases, the oxidation of fatty acids increases, and the ability to synthesize fatty acids decreases. On the one hand, the energy supply required by tumor tissues decreases. On the other hand, the formation of cell membranes is inhibited and the ability to divide rapidly is weakened (38). With the deepening of the understanding of the SCD gene, SCD has been shown to be involved in the occurrence and development of a variety of malignant tumors. Many studies have pointed out that SCD is highly expressed in malignant tumors such as lung cancer, gastrointestinal tumors, urinary system tumors, and gynecological tumors. Reducing the expression of SCD at the genetic or pharmacological level can inhibit the proliferation, invasion, and migration of many different types of tumor cells (39). In this study, overexpression of SCD promoted the proliferation, migration, and invasion of Rb cells in vitro, while low expression of SCD inhibited the proliferation, migration, and invasion of Rb cells in vitro. Therefore, SCD inhibition may be a novel target for anticancer therapy (39,40). Furthermore, we observed that the expression level of SCD was significantly down-regulated in SO-RB50 and Y79 cells treated with UA, which proved the inhibitory effect of UA on SCD. Also, UA inhibited the facilitation of SCD on the cell proliferation, migration, and invasion of SO-RB50 and Y79 cells.
A large number of studies have proven the important role of SCD expression in lipid metabolism. This enzyme is not only involved in the pathology of obesity, but is also a key regulator of other types of serious diseases related to inflammation and stress. The expression of SCD needs to be strictly controlled within the normal range to maintain cell function. The sharp increase in SCD expression is conducive to fat accumulation, leading to obesity and insulin resistance, while significant suppression of SCD expression may promote fat catabolism, but at the cost of increased cell inflammation and stress. Therefore, the dysfunction of SCD expression regulation is associated with many types of serious diseases, such as obesity, insulin resistance, cancer, and inflammatory diseases. Although SCD deficiency provides beneficial metabolic effects, it actually causes pancreatic β-cell dysfunction in vitro and in vivo. Observations of the effects of SCD deficiency on liver stress and inflammatory diseases (including atherosclerosis and enterocolitis) also vary in different studies, which may be due to the different disease models used and the methods used to inhibit SCD expression (41). The latest research showed that the absence of SCD in melanoma promotes inflammation (42). In this study, GSEA showed that high expression levels of SCD inhibited inflammation. At the same time, cytokine analysis results showed that overexpression of SCD inhibited inflammation, while low expression of SCD promoted inflammation.
In summary, UA can inhibit the proliferation, migration, and invasion of Rb SO-RB50 and Y79 cells, and its mechanism of action may be achieved by down-regulating the expression of SCD. This study thoroughly explored the related molecular regulatory mechanisms of UA in inhibiting the proliferation, migration, and invasion of Rb SO-RB50 and Y79 cells, which provides a theoretical basis for further basic research, clinical research, and applications of UA in the future. It can be expected that with the in-depth research and clinical promotion of the anti-tumor mechanism of UA, it may become a natural anti-tumor drug with few side effects, good efficacy, and a low price.
Acknowledgments
Funding: None.
Footnote
Reporting Checklist: The authors have completed the ARRIVE reporting checklist. Available at https://dx.doi.org/10.21037/atm-21-4617
Data Sharing Statement: Available at https://dx.doi.org/10.21037/atm-21-4617
Conflicts of Interest: All authors have completed the ICMJE uniform disclosure form (available at https://dx.doi.org/10.21037/atm-21-4617). The authors have no conflicts of interest to declare.
Ethical Statement: The authors are accountable for all aspects of the work in ensuring that questions related to the accuracy or integrity of any part of the work are appropriately investigated and resolved. The study was conducted in accordance with the Declaration of Helsinki (as revised in 2013). All animal experiments were carried out according to the NIH Guide for the Care and Use of Laboratory Animals and were approved by the Suzhou high tech Zone People’s Hospital.
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(English Language Editor: C. Betlazar-Maseh)